Statistical Filtering in Multiple Sequence Alignment

Dnr:

SNIC 2016/7-41

Type:

SNAC Small

Principal Investigator:

Raja hashim Ali

Affiliation:

Uppsala universitet

Start Date:

2016-04-06

End Date:

2018-05-01

Primary Classification:

10203: Bioinformatik (beräkningsbiologi) (tillämpningar under 10610)

Webpage:

http://www.ieg.uu.se/evolutionary-biology/whelan/research/

Allocation

Abstract

Identifying columns with low confidence in multiple sequence alignment is critical to many subsequent applications that use these multiple sequence alignments. I will be working on developing algorithms and methods for inferring confidence values on columns of a given MSA.