SNIC
SUPR
SNIC SUPR
Genome sequencing of bacteria isolated from soil
Dnr:

SNIC 2017/7-381

Type:

SNAC Small

Principal Investigator:

Daniel Brink

Affiliation:

Lunds universitet

Start Date:

2017-12-22

End Date:

2019-01-01

Primary Classification:

10610: Bioinformatics and Systems Biology (methods development to be 10203)

Allocation

Abstract

This project will deal with whole genome sequencing and -assembly (NGS reads) for bacterial isolates resulting from a screening of different soil samples for growth on lignocellulose-derived compounds. Preliminary 16S sequencing have identified the genus of two of the isolates as Pseudomonas. The project is a collaboration between Applied Microbiology and Chemical Engineering at Lund University.