SNIC
SUPR
SNIC SUPR
Genomic and transcriptomic analysis on B cell lymphomas
Dnr:

SNIC 2018/8-70

Type:

SNAC Small

Principal Investigator:

Bo Zhang

Affiliation:

Karolinska Institutet

Start Date:

2018-02-12

End Date:

2019-03-01

Primary Classification:

10610: Bioinformatics and Systems Biology (methods development to be 10203)

Webpage:

Allocation

Abstract

An systematic integration of WGS, WES, RNAseq and potentially proteomics data for studying B-cell lymphomagenesis. Standard data analysis pipeline based on GATK will be customized for identification of variants. Methodological development will be made for improving data analysis of CRISPR functional screening, RNA editing, single-cell RNAseq, B-cell class-switching recombination, and etc.